TAtool - Transcriptome analysis tool

PCA

Interactive Principal Component Analysis


2D PCA

3D PCA


Vector PCA parameters

Choose binary group

Differential expression

Apply different thresholds levels for P value and Fold Change (FC) parameters (Log2FC) to visualize de DE data.

Filtering criteria



Higher expressed genes


            

Lower expressed genes


            

Clusters

Inspect the clusterized data


Cluster plot


Cluster information


Individual gene plot


Positive profile genes


                    

Negative profile genes


                    

Enrichment description

Plot a expression profile, using the gene names from the current cluster and their vaules from the oposite condition

Cluster genes represented with the other condition

Description


Cluster genes represented in the other condition clusters

Network analysis

DESCRIPTION


Network overview

DESCRIPTION



Network metrics table

Select a gene to obtain its first degree neighbours


First degree neighbours


          

Gene explorer

Visualize gene expression profiles and enrich custom gene lists.



Contact info


T4F